Uses of Class
org.biojava.nbio.genome.io.fastq.FastqBuilder

Packages that use FastqBuilder

Package	Description
org.biojava.nbio.genome.io.fastq	FASTQ and variants sequence format I/O.

Uses of FastqBuilder in org.biojava.nbio.genome.io.fastq

Methods in org.biojava.nbio.genome.io.fastq that return FastqBuilder

Modifier and Type	Method	Description
FastqBuilder	FastqBuilder.appendQuality(String quality)	Return this FASTQ formatted sequence builder configured with the specified quality scores appended to its current quality scores.
FastqBuilder	FastqBuilder.appendSequence(String sequence)	Return this FASTQ formatted sequence builder configured with the specified sequence appended to its current sequence.
static FastqBuilder	Fastq.builder()	Create and return a new FastqBuilder.
static FastqBuilder	Fastq.builder(Fastq fastq)	Create and return a new FastqBuilder configured from the specified FASTQ formatted sequence.
FastqBuilder	FastqBuilder.withDescription(String description)	Return this FASTQ formatted sequence builder configured with the specified description.
FastqBuilder	FastqBuilder.withQuality(String quality)	Return this FASTQ formatted sequence builder configured with the specified quality scores.
FastqBuilder	FastqBuilder.withSequence(String sequence)	Return this FASTQ formatted sequence builder configured with the specified sequence.
FastqBuilder	FastqBuilder.withVariant(FastqVariant variant)	Return this FASTQ formatted sequence builder configured with the specified FASTQ sequence format variant.