StructureProvider (biojava 6.0.0 API)

All Known Subinterfaces:

StructureIOFile

All Known Implementing Classes:

BcifFileReader, CifFileReader, LocalPDBDirectory, MMTFFileReader, PDBFileReader
```
public interface StructureProvider
```
A class that can provide a protein structure object from somewhere.

Since:

3.2

Author:

Andreas Prlic

Method Summary

All Methods Instance Methods Abstract Methods
Modifier and Type	Method	Description
`FileParsingParameters`	`getFileParsingParameters()`	Get the parameters that should be used for file parsing
`Structure`	`getStructureById(String pdbId)`	Get the structure for a PDB ID
`Structure`	`getStructureById(PdbId pdbId)`	Get the structure for a PDB ID
`void`	`setFileParsingParameters(FileParsingParameters params)`	Set the parameters that should be used for file parsing

- Method Detail
  - getStructureById
```
Structure getStructureById(String pdbId)
                    throws StructureException,
                           IOException
```
    Get the structure for a PDB ID
    
    Parameters:
    
    pdbId -
    
    Returns:
    
    Throws:
    
    StructureException
    
    IOException
  - getStructureById
```
Structure getStructureById(PdbId pdbId)
                    throws StructureException,
                           IOException
```
    Get the structure for a PDB ID
    
    Parameters:
    
    pdbId -
    
    Returns:
    
    Throws:
    
    StructureException
    
    IOException
  - setFileParsingParameters
```
void setFileParsingParameters(FileParsingParameters params)
```
    Set the parameters that should be used for file parsing
    
    Parameters:
    
    params - FileParsingParameters
  - getFileParsingParameters
```
FileParsingParameters getFileParsingParameters()
```
    Get the parameters that should be used for file parsing
    
    Returns:
    
    the FileParsingParameters that are configuring the behavior of the parser