Package org.biojava.nbio.structure.io.cif
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Interface Summary Interface Description ChemCompConsumer Create theChemicalComponentDictionary
from CIF data.CifBean Flag for BioJava beans that resemble categories defined by the mmCIF schema.CifFileConsumer<S> Defines a rather generic interface which allows to populate some data structure with data parsed from a CIF file.CifFileSupplier<S> Create a CifFile instance for a given container of structure data.CifStructureConsumer Defines the categories to consume during CIF parsing.MetalBondConsumer Consume metal bond data. -
Class Summary Class Description AbstractCifFileSupplier<S> Convert a BioJava object to a CifFile.AbstractCifFileSupplier.WrappedAtom Wrapped atoms represent individual atoms enriched with model- and chain-level information.ChemCompConsumerImpl Consumes a CCD file to create theChemicalComponentDictionary
.ChemCompConverter Convert CifFiles to chem comps.CifChainSupplierImpl Convert a chain to aCifFile
.CifStructureConsumerImpl An implementation of a CifFileConsumer for BioJava.CifStructureConverter Convert BioJava structures to CifFiles and vice versa.CifStructureSupplierImpl Convert a structure to a CifFile.MetalBondConsumerImpl Created by andreas on 6/9/16.MetalBondConverter Created by andreas on 6/6/16.