| BetaBridge |
Container that represents a beta Bridge between two residues.
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| DSSPParser |
Class to parse a DSSP file (output of the DSSP program),
that contains the secondary structure assignment of a structure.
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| HBond |
Container that represents a hidrogen bond.
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| Ladder |
A Ladder is a set of one or more consecutive bridges of identical type.
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| SecStrucCalc |
Calculate and assign the secondary structure (SS) to the
Groups of a Structure object.
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| SecStrucElement |
A secondary structure element (SSE) is an object representing a block of
sequential residues that share the same secondary structure type.
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| SecStrucInfo |
Container for the secondary structure information of a single residue.
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| SecStrucState |
This class extends the basic container for secondary structure annotation,
including all the information used in the DSSP algorithm.
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| SecStrucTools |
This class contains methods for obtaining and converting secondary structure
information from BioJava Structures. |