| CESymmParameters |
Provides parameters to CeSymm. |
| CESymmParameters.OrderDetectorMethod |
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| CESymmParameters.RefineMethod |
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| CESymmParameters.SymmetryType |
The internal symmetry detection can be divided into two types: CLOSE:
includes the circular and dihedral symmetries, and OPEN: includes the
helical and protein repeats symmetries.
|
| CeSymmResult |
This Class stores all the relevant information of an internal symmetry result
obtained with CeSymm.
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| OrderDetector |
A method to decide the order of symmetry (number of subunits)
given a structure self-alignment, calculated by CE-Symm.
|
| RefinerFailedException |
Refinement of the self-alignment failed.
|
| ResidueGroup |
A ResidueGroup is a set of residues that are part of a maximally connected
component of the self-Alignment Graph in symmetry analysis.
|
| SymmetryAxes |
Data Structure that stores all the symmetry axis that describe
the symmetry of a structure.
|
| SymmetryAxes.Axis |
Represents an axis of symmetry
|
| SymmetryRefiner |
Interface for all symmetry refinement implementations.
|