Package org.biojava.nbio.protmod.io

Class ProteinModificationXmlReader

java.lang.Object

org.biojava.nbio.protmod.io.ProteinModificationXmlReader

public final class ProteinModificationXmlReader
extends Object

Since:

3.0

Author:

Jianjiong Gao

Method Summary

Modifier and Type	Method	Description
static void	registerProteinModificationFromXml(InputStream isXml)	Read protein modifications from XML file and register them.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

registerProteinModificationFromXml

public static void registerProteinModificationFromXml(InputStream isXml)
                                               throws IOException,
ParserConfigurationException,
SAXException

Read protein modifications from XML file and register them.

Parameters:

isXml - InputStream of the XML file.

Throws:

IOException - if failed to read the XML file.

ParserConfigurationException - if parse errors occur.

SAXException - the DocumentBuilder cannot be created.