Package org.biojava.nbio.structure.align.fatcat.calc

package org.biojava.nbio.structure.align.fatcat.calc

Related Packages

Package	Description
org.biojava.nbio.structure.align.fatcat	Classes related to the implementation of the FATCAT alignment algorithm, here called jFATCAT.

Classes

Class	Description
AFPCalculator	A class that performs calculations on AFPChains
AFPChainer	A class to chain AFPs to an alignment
AFPOptimizer
AFPPostProcessor	does post processing after alignment chaingin
FatCatAligner	A class that does calculations on an AFPChain
FatCatParameters
FCAlignHelper
SigEva
StructureAlignmentOptimizer