Uses of Package
org.biojava.nbio.core.sequence.compound
Packages that use org.biojava.nbio.core.sequence.compound
Package
Description
Set of classes that responsible for providing APIs and Command Prompt access to generate some basic physico-chemical properties of protein sequences.
Set of classes that handles the reading and writing of xml files.
FASTQ and variants sequence format I/O.
Classes related to the implementation of the CE alignment algorithm, here called jCE.
Input and Output of Structures
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.aaproperties
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.aaproperties.xml
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.alignment
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.alignment.matrices
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence.compoundClassDescriptionAmbiguity set for hybrid DNA/RNA sequences.Used to describe an Amino Acid.Set of proteinogenic amino acids.
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence.io
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence.storage
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence.template
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.core.sequence.views
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.genome.io.fastq
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.structure.align.ce
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.structure.cluster
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Classes in org.biojava.nbio.core.sequence.compound used by org.biojava.nbio.structure.io