- Type Parameters:
C- The type of compound to edit
Interface for carrying out edit operations on a Sequence. The 3 major methods of Editing are supported
Nested Class Summary
Nested Classes Modifier and Type Interface Description
Edit.AbstractEdit<C extends Compound>Abstract class which defines all edit operations as a call to discover what 5' and 3' ends of an editing Sequence should be joined together with a target Sequence.
Edit.Delete<C extends Compound>Implementation which allows for the deletion of bases from a Sequence
Edit.Insert<C extends Compound>Edit implementation which allows us to insert a base at any position in a Sequence.
Edit.Substitute<C extends Compound>Allows for the substitution of bases into an existing Sequence.