Package org.biojava.nbio.core.sequence.template

Interface ProxySequenceReader<C extends Compound>

All Superinterfaces:

Accessioned, Iterable<C>, Sequence<C>, SequenceReader<C>

All Known Implementing Classes:

ArrayListProxySequenceReader, BitSequenceReader, FourBitSequenceReader, GenbankProxySequenceReader, JoiningSequenceReader, RnaSequenceView, SequenceFileProxyLoader, SingleCompoundSequenceReader, StringProxySequenceReader, TwoBitSequenceReader, UniprotProxySequenceReader

public interface ProxySequenceReader<C extends Compound>
extends SequenceReader<C>

Method Summary

Methods inherited from interface org.biojava.nbio.core.sequence.template.Accessioned

getAccession

Methods inherited from interface java.lang.Iterable

forEach, iterator, spliterator

Methods inherited from interface org.biojava.nbio.core.sequence.template.Sequence

countCompounds, getAsList, getCompoundAt, getCompoundSet, getIndexOf, getInverse, getLastIndexOf, getLength, getSequenceAsString, getSubSequence

Methods inherited from interface org.biojava.nbio.core.sequence.template.SequenceReader

setCompoundSet, setContents