Package org.biojava.nbio.structure.gui

Class BiojavaJmol

java.lang.Object

org.biojava.nbio.structure.gui.BiojavaJmol

public class BiojavaJmol
extends Object

A class that provides a simple GUI for Jmol

Since:

1.6

Author:

Andreas Prlic

Field Summary

Fields

Modifier and Type	Field	Description
static final String	adapter
static final String	smartAdapter
static final String	viewer

Constructor Summary

Constructors

Constructor	Description
BiojavaJmol()

Method Summary

Modifier and Type	Method	Description
void	evalString(String rasmolScript)
JFrame	getFrame()
static boolean	jmolInClassPath()	returns true if Jmol can be found in the classpath, otherwise false.
static void	main(String[] args)
void	setStructure(Structure s)
void	setTitle(String label)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

viewer

public static final String viewer

See Also:

• Constant Field Values

adapter

public static final String adapter

See Also:

• Constant Field Values

smartAdapter

public static final String smartAdapter

See Also:

• Constant Field Values

Constructor Details

BiojavaJmol

public BiojavaJmol()

Method Details

main

public static void main(String[] args)

jmolInClassPath

public static boolean jmolInClassPath()

returns true if Jmol can be found in the classpath, otherwise false.

Returns:

true/false depending if Jmol can be found

evalString

public void evalString(String rasmolScript)

setStructure

public void setStructure(Structure s)

setTitle

public void setTitle(String label)

getFrame

public JFrame getFrame()