org.biojava.bio.alignment

Interface AlignmentElement

All Known Implementing Classes:

SimpleAlignmentElement

public interface AlignmentElement

AlignmentElement is a class which represents a SymbolList and its location within an Alignment This is for use in UnequalLengthAlignments and ARAlignments.

Author:

David Waring

Method Summary

Methods

Modifier and Type	Method and Description
String	getLabel()
Location	getLoc()
SymbolList	getSymbolList()
void	setLoc(Location nLoc)

Method Detail

getLabel

String getLabel()

getLoc

Location getLoc()

getSymbolList

SymbolList getSymbolList()

setLoc

void setLoc(Location nLoc)
            throws BioError

Throws:

BioError