Uses of Interface
org.biojava.bio.CollectionConstraint

Packages that use CollectionConstraint

Package	Description
org.biojava.bio	The core classes that will be used throughout the bio packages.
org.biojava.bio.seq.io.filterxml	Tools for reading and writing an XML representation of BioJava's FeatureFilter language.

Uses of CollectionConstraint in org.biojava.bio

Classes in org.biojava.bio that implement CollectionConstraint

Modifier and Type	Class and Description
static class	CollectionConstraint.AllValuesIn CollectionConstraint which validates all members of a Collection.
static class	CollectionConstraint.And A collection constraint that accpepts collections iff they are accepted by both child constraints.
static class	CollectionConstraint.Contains CollectionConstraint which validates a portion of a Collection.
static class	CollectionConstraint.Or A collection constraint that accepts items iff they are accepted by either child constraints.

Fields in org.biojava.bio declared as CollectionConstraint

Modifier and Type	Field and Description
static CollectionConstraint	CollectionConstraint.ANY ANY is a constraint which accepts a property for addition under all conditions.
static CollectionConstraint	CollectionConstraint.EMPTY EMPTY is a constraint which only accepts the empty set.
static CollectionConstraint	CollectionConstraint.NONE NONE is a constraint which accepts no value for a property under any condition.

Methods in org.biojava.bio that return CollectionConstraint

Modifier and Type	Method and Description
CollectionConstraint	CollectionConstraint.And.getChild1() Get the first child CollectionConstraint.
CollectionConstraint	CollectionConstraint.Or.getChild1() Get the first child CollectionConstraint.
CollectionConstraint	CollectionConstraint.And.getChild2() Get the seccond child CollectionConstraint.
CollectionConstraint	CollectionConstraint.Or.getChild2() Get the seccond child CollectionConstraint.
CollectionConstraint	AnnotationType.getConstraint(Object key) Retrieve the constraint that will be applied to all properties with a given key.
CollectionConstraint	AnnotationType.Impl.getConstraint(Object key)
CollectionConstraint	AnnotationType.getDefaultConstraint() Get the CollectionConstraint that will be applied to all properties without an explicit binding.
CollectionConstraint	AnnotationType.Impl.getDefaultConstraint()
static CollectionConstraint	AnnotationTools.intersection(CollectionConstraint cc1, CollectionConstraint cc2) Return the CollectionConstraint which accept only collections accepted by both of those specified.
static CollectionConstraint	AnnotationTools.union(CollectionConstraint cc1, CollectionConstraint cc2) Calculate a CollectionConstaint that will accept all items accepted by either constraint.

Methods in org.biojava.bio with parameters of type CollectionConstraint

Modifier and Type	Method and Description
static CollectionConstraint	AnnotationTools.intersection(CollectionConstraint cc1, CollectionConstraint cc2) Return the CollectionConstraint which accept only collections accepted by both of those specified.
void	AnnotationType.setConstraint(Object key, CollectionConstraint con) Specifies the constraint to apply to the specified property.
void	AnnotationType.Impl.setConstraint(Object key, CollectionConstraint cc)
void	AnnotationType.setDefaultConstraint(CollectionConstraint cc) Specifies the default constraint to apply to properties where no other constraint is specified.
void	AnnotationType.Impl.setDefaultConstraint(CollectionConstraint cc)
boolean	CollectionConstraint.subConstraintOf(CollectionConstraint subConstraint) subConstraintOf returns true if the constraint is a sub-constraint.
boolean	CollectionConstraint.AllValuesIn.subConstraintOf(CollectionConstraint cc)
boolean	CollectionConstraint.Contains.subConstraintOf(CollectionConstraint cc)
boolean	CollectionConstraint.And.subConstraintOf(CollectionConstraint pc)
boolean	CollectionConstraint.Or.subConstraintOf(CollectionConstraint pc)
static CollectionConstraint	AnnotationTools.union(CollectionConstraint cc1, CollectionConstraint cc2) Calculate a CollectionConstaint that will accept all items accepted by either constraint.

Constructors in org.biojava.bio with parameters of type CollectionConstraint

Constructor and Description
AnnotationType.Impl(CollectionConstraint unknown) Create a new Impl with a default collection constraint.
CollectionConstraint.And(CollectionConstraint c1, CollectionConstraint c2) Create a new And from two child constraints.
CollectionConstraint.Or(CollectionConstraint c1, CollectionConstraint c2) Create a new Or from two child constraints.

Uses of CollectionConstraint in org.biojava.bio.seq.io.filterxml

Methods in org.biojava.bio.seq.io.filterxml that return CollectionConstraint

Modifier and Type	Method and Description
CollectionConstraint	XMLAnnotationTypeHandler.CollectionConstraintHandler.getCollectionConstraint()

Methods in org.biojava.bio.seq.io.filterxml with parameters of type CollectionConstraint

Modifier and Type	Method and Description
void	XMLAnnotationTypeWriter.addXMLCollectionConstraintWriter(CollectionConstraint pc, XMLAnnotationTypeWriter.XMLCollectionConstraintWriter xfw) Register a writer for a singleton property constraint.
void	XMLAnnotationTypeWriter.XMLCollectionConstraintWriter.writeCollectionConstraint(CollectionConstraint pc, XMLWriter xw, XMLAnnotationTypeWriter config)