org.biojava.bio.dp

Class SimpleModelInState

java.lang.Object

org.biojava.utils.AbstractChangeable

org.biojava.bio.symbol.AbstractSymbol

org.biojava.bio.symbol.FundamentalAtomicSymbol

org.biojava.bio.dp.SimpleModelInState

All Implemented Interfaces:

Serializable, Annotatable, ModelInState, State, AtomicSymbol, BasisSymbol, Symbol, Changeable

public class SimpleModelInState
extends FundamentalAtomicSymbol
implements ModelInState

Author:

Matthew Pocock, Thomas Down

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.bio.Annotatable

Annotatable.AnnotationForwarder

Field Summary

Fields inherited from class org.biojava.bio.symbol.AbstractSymbol

annotationForwarder

Fields inherited from interface org.biojava.bio.Annotatable

ANNOTATION

Constructor Summary

Constructors

Constructor and Description
SimpleModelInState(MarkovModel model, String name)

Method Summary

Methods

Modifier and Type	Method and Description
MarkovModel	getModel() The model that is inside this state.

Methods inherited from class org.biojava.bio.symbol.FundamentalAtomicSymbol

getAnnotation, getMatches, getName, getSymbols

Methods inherited from class org.biojava.bio.symbol.AbstractSymbol

getChangeSupport, toString

Methods inherited from class org.biojava.utils.AbstractChangeable

addChangeListener, addChangeListener, generateChangeSupport, hasListeners, hasListeners, isUnchanging, removeChangeListener, removeChangeListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.biojava.bio.symbol.BasisSymbol

getSymbols

Methods inherited from interface org.biojava.bio.symbol.Symbol

getMatches, getName

Methods inherited from interface org.biojava.bio.Annotatable

getAnnotation

Methods inherited from interface org.biojava.utils.Changeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Constructor Detail

SimpleModelInState

public SimpleModelInState(MarkovModel model,
                  String name)

Method Detail

getModel

public MarkovModel getModel()

Description copied from interface: ModelInState

The model that is inside this state.

Specified by:

getModel in interface ModelInState