Package | Description |
---|---|
org.biojava.bio.program.blast2html |
Code for generating HTML reports from blast output
|
Class and Description |
---|
AbstractAlignmentStyler
Abstract implementation of
AlignmentStyler , contains
utility methods for generating a set of HTML styles from a list of
RGB colours. |
AlignmentMarker
Class to do simple HTML colouring of sequence alignments.
|
ColourCommand
Interface for specifying whether a particular pair
of residues/bases should be coloured.
|
DatabaseURLGenerator
Takes a database ID and some configuration properties
( such as base URL ) and returns either a URL or
a full anchor tag.
|
HTMLRenderer
Renders HTML version of blast-like output.
|
URLGeneratorFactory
Interface for a factory method to return a list of
0, 1 or more
DatabaseURLGenerator instances. |
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