Uses of Interface
org.biojava.bio.seq.db.IDMaker

Packages that use IDMaker

Package	Description
org.biojava.bio.seq.db	Collections of biological sequence data.
org.biojavax.bio.db	Interactions between biojavax objects and a DB.

Uses of IDMaker in org.biojava.bio.seq.db

Classes in org.biojava.bio.seq.db that implement IDMaker

Modifier and Type	Class and Description
static class	IDMaker.ByName
static class	IDMaker.ByURN

Fields in org.biojava.bio.seq.db declared as IDMaker

Modifier and Type	Field and Description
static IDMaker	IDMaker.byName A simple implementation of IDMaker that hashes by sequence name.
static IDMaker	IDMaker.byURN A simple implementation of IDMaker that hashes by URN.

Methods in org.biojava.bio.seq.db that return IDMaker

Modifier and Type	Method and Description
IDMaker	HashSequenceDB.getIDMaker() Retrieve the IDMaker associated with this database.

Constructors in org.biojava.bio.seq.db with parameters of type IDMaker

Constructor and Description
HashSequenceDB(IDMaker idMaker) Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have a null name.
HashSequenceDB(IDMaker idMaker, String name) Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.
IndexedSequenceDB(IDMaker idMaker, IndexStore indexStore) Create an IndexedSequenceDB by specifying both the IDMaker and IndexStore used.

Uses of IDMaker in org.biojavax.bio.db

Methods in org.biojavax.bio.db that return IDMaker

Modifier and Type	Method and Description
IDMaker	HashRichSequenceDB.getIDMaker() Retrieve the IDMaker associated with this database.

Constructors in org.biojavax.bio.db with parameters of type IDMaker

Constructor and Description
HashRichSequenceDB(IDMaker idMaker) Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have a null name.
HashRichSequenceDB(IDMaker idMaker, String name) Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.