Uses of Interface
org.biojava.bio.seq.db.IndexStore

Packages that use IndexStore

Package	Description
org.biojava.bio.seq.db	Collections of biological sequence data.

Uses of IndexStore in org.biojava.bio.seq.db

Classes in org.biojava.bio.seq.db that implement IndexStore

Modifier and Type	Class and Description
class	BioIndex The original object for indexing sequence files.
class	EmblCDROMIndexStore EmblCDROMIndexStores implement a read-only IndexStore backed by EMBL CD-ROM format binary indices.
class	TabIndexStore Implements IndexStore as a serialized file for the java data and a tab-delimited file of offsets.

Methods in org.biojava.bio.seq.db that return IndexStore

Modifier and Type	Method and Description
IndexStore	IndexedSequenceDB.getIndexStore() Retrieve the IndexStore.

Constructors in org.biojava.bio.seq.db with parameters of type IndexStore

Constructor and Description
IndexedSequenceDB(IDMaker idMaker, IndexStore indexStore) Create an IndexedSequenceDB by specifying both the IDMaker and IndexStore used.
IndexedSequenceDB(IndexStore indexStore) Create an IndexedSequenceDB by specifying IndexStore used.