Uses of Package
org.biojava.bio.seq.homol

Packages that use org.biojava.bio.seq.homol

Package	Description
org.biojava.bio.seq.homol	The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.

Classes in org.biojava.bio.seq.homol used by org.biojava.bio.seq.homol

Class and Description
Homology Signifies that two or more features are homologous.
SimilarityPairFeature SimilarityPairFeature describes a pairwise similarity between two nucleotide sequences (as it extends StrandedFeature).

Classes in org.biojava.bio.seq.homol used by org.biojava.bio.seq.impl

Class and Description
Homology Signifies that two or more features are homologous.
HomologyFeature
HomologyFeature.Template
SimilarityPairFeature SimilarityPairFeature describes a pairwise similarity between two nucleotide sequences (as it extends StrandedFeature).
SimilarityPairFeature.Template Template for construction of SimilarityPairFeatures.