org.biojava.bio.seq.io.agave

Class AGAVEXrefs

java.lang.Object

org.biojava.bio.seq.io.agave.AGAVEXrefs

public class AGAVEXrefs
extends Object

xrefs

Author:

Hanning Ni Doubletwist Inc, Greg Cox

Constructor Summary

Constructors

Constructor and Description
AGAVEXrefs()

Method Summary

Methods

Modifier and Type	Method and Description
void	addDbId(AGAVEDbId id) add @param id
void	addXref(AGAVEXref xref) add @param xref
Iterator	getDbIds() return a set of DbId
Iterator	getXrefs() return a set of AGAVEXref
String	toString() the agave xml representation of xrefs
String	toString(String indent, String indent_unit)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AGAVEXrefs

public AGAVEXrefs()

Method Detail

addDbId

public void addDbId(AGAVEDbId id)

add @param id

addXref

public void addXref(AGAVEXref xref)

add @param xref

getDbIds

public Iterator getDbIds()

return a set of DbId

getXrefs

public Iterator getXrefs()

return a set of AGAVEXref

toString

public String toString(String indent,
              String indent_unit)

Parameters:

indent - the leading space

indent_unit - the unit of indenting for xml format

toString

public String toString()

the agave xml representation of xrefs

Overrides:

toString in class Object