| Package | Description | 
|---|---|
| org.biojava.bio.seq.io.agave | Classes for converting between AGAVE XML and BioJava objects. | 
| Modifier and Type | Method and Description | 
|---|---|
| AGAVEIdAlias[] | SimpleAnnotFilter. getIdAlias(Annotation annot) | 
| AGAVEIdAlias[] | AGAVEAnnotFilter. getIdAlias(Annotation annot) | 
| AGAVEIdAlias[] | Agave2AgaveAnnotFilter. getIdAlias(Annotation annot) | 
| Modifier and Type | Method and Description | 
|---|---|
| void | AGAVEIdAliasCallbackItf. addIdAlias(AGAVEIdAlias id) | 
| void | AGAVEClassificationHandler. addIdAlias(AGAVEIdAlias id) | 
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