Package | Description |
---|---|
org.biojava.bio.seq.io.game12 |
Event-driven parsing system for the Gene Annotation Markup Elements (GAME).
|
Modifier and Type | Class and Description |
---|---|
class |
GAMEAnnotationHandler
Handles the GAME <annotation> element
|
class |
GAMEAspectHandler
Handles the GAME <aspect> element
|
class |
GAMEDbxrefHandler
Handles the GAME <dbxref> element
|
class |
GAMEFeatureSetHandler
Handles the GAME <feature_set> element
this element is used to represent transcripts.
|
class |
GAMEFeatureSpanHandler
Handles the GAME <feature_span> element
|
class |
GAMEFeatureSpanHandler.SeqRelHandler |
class |
GAMEGeneHandler
Handles the GAME <annotation> element
|
class |
GAMEHandler
Handles the root GAME element
|
class |
GAMEPropertyHandler
Handles the GAME <dbxref> element
|
class |
GAMESeqHandler
Handles the GAME <seq> element
|
class |
GAMESeqRelHandler
Handles the GAME <
|
class |
GAMESpanHandler
Handles the GAME <> element.
|
Modifier and Type | Field and Description |
---|---|
StAXFeatureHandler |
StAXFeatureHandler.staxenv
Nesting class that provides callback interfaces to nested class
|
Modifier and Type | Method and Description |
---|---|
StAXContentHandler |
StAXHandlerFactory.getHandler(StAXFeatureHandler staxenv)
Return a suitable StAX content handler.
|
Copyright © 2014 BioJava. All rights reserved.