Package | Description |
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org.biojava.bio.symbol |
Representation of the Symbols that make up a sequence, and locations within
them.
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Modifier and Type | Field and Description |
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static FuzzyLocation.RangeResolver |
FuzzyLocation.RESOLVE_AVERAGE
Use the arithmetic mean of the `inner' and `outer' values, unless the
outer value is unbounded.
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static FuzzyLocation.RangeResolver |
FuzzyLocation.RESOLVE_INNER
Always use the `inner' values.
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static FuzzyLocation.RangeResolver |
FuzzyLocation.RESOLVE_OUTER
Use the `outer' values, unless they are unbounded in which case the
`inner' values are used.
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Modifier and Type | Method and Description |
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FuzzyLocation.RangeResolver |
FuzzyLocation.getResolver()
Retrieve the Location that this decorates.
|
Modifier and Type | Method and Description |
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protected void |
FuzzyLocation.initializeVariables(int outerMin,
int outerMax,
int innerMin,
int innerMax,
boolean isMinFuzzy,
boolean isMaxFuzzy,
FuzzyLocation.RangeResolver resolver)
Refactored initialization code from the constructors.
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Constructor and Description |
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FuzzyLocation(int outerMin,
int outerMax,
int innerMin,
int innerMax,
boolean isMinFuzzy,
boolean isMaxFuzzy,
FuzzyLocation.RangeResolver resolver)
Create a new FuzzyLocation with endpoints (outerMin.innerMin) and
(innerMax.outerMax).
|
FuzzyLocation(int outerMin,
int outerMax,
int innerMin,
int innerMax,
FuzzyLocation.RangeResolver resolver)
Create a new FuzzyLocation with endpoints (outerMin.innerMin) and (innerMax.outerMax).
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