Package | Description |
---|---|
org.biojava.bio.seq |
Classes and interfaces for defining biological sequences and informatics
objects.
|
org.biojava.bio.symbol |
Representation of the Symbols that make up a sequence, and locations within
them.
|
Modifier and Type | Method and Description |
---|---|
static ManyToOneTranslationTable |
RNATools.getGeneticCode(int table_num)
Retrieve a TranslationTable by number.
|
static ManyToOneTranslationTable |
RNATools.getGeneticCode(String name)
Retrieve a TranslationTable by name.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractManyToOneTranslationTable
an abstract class implementing basic functionality
of a translation table that translates Symbols from
one Alphabet to another.
|
class |
SimpleGeneticCodeTable
A genetic code translation table representing a translation table in the
DDBJ/EMBL/GenBank Feature Table (appendix V).
|
class |
SimpleManyToOneTranslationTable
A no-frills implementation of a translation table that
maps between two alphabets.
|
Modifier and Type | Method and Description |
---|---|
ManyToOneTranslationTable |
SimpleCodonPref.getGeneticCode() |
ManyToOneTranslationTable |
CodonPref.getGeneticCode()
the genetic code that this codon
preference is based on.
|
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