org.biojava.ontology

Class IntegerOntology.IntTerm

java.lang.Object

org.biojava.utils.Unchangeable

org.biojava.ontology.IntegerOntology.IntTerm

All Implemented Interfaces:

Annotatable, Term, Changeable

Enclosing class:

IntegerOntology

public final class IntegerOntology.IntTerm
extends Unchangeable
implements Term

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.ontology.Term

Term.Impl

Nested classes/interfaces inherited from interface org.biojava.bio.Annotatable

Annotatable.AnnotationForwarder

Field Summary

Fields inherited from interface org.biojava.ontology.Term

ONTOLOGY

Fields inherited from interface org.biojava.bio.Annotatable

ANNOTATION

Constructor Summary

Constructors

Constructor and Description
IntegerOntology.IntTerm(int val)
IntegerOntology.IntTerm(int val, Object[] synonyms)

Method Summary

Methods

Modifier and Type	Method and Description
void	addSynonym(Object synonym) Add a synonym for this term.
Annotation	getAnnotation() Should return the associated annotation object.
String	getDescription() Return a human-readable description of this term, or the empty string if none is available.
String	getName() Return the name of this term.
Ontology	getOntology() Return the ontology in which this term exists.
Object[]	getSynonyms() Return the synonyms for this term.
int	intValue()
void	removeSynonym(Object synonym) Remove a synonym for this term.
void	setDescription(String description) set the description of the term;

Methods inherited from class org.biojava.utils.Unchangeable

addChangeListener, addChangeListener, addForwarder, getForwarders, getListeners, isUnchanging, removeChangeListener, removeChangeListener, removeForwarder

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.biojava.utils.Changeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Constructor Detail

IntegerOntology.IntTerm

public IntegerOntology.IntTerm(int val)

IntegerOntology.IntTerm

public IntegerOntology.IntTerm(int val,
                       Object[] synonyms)

Method Detail

addSynonym

public void addSynonym(Object synonym)

Description copied from interface: Term

Add a synonym for this term.

Specified by:

addSynonym in interface Term

Parameters:

synonym - the synonym

removeSynonym

public void removeSynonym(Object synonym)

Description copied from interface: Term

Remove a synonym for this term.

Specified by:

removeSynonym in interface Term

getSynonyms

public Object[] getSynonyms()

Description copied from interface: Term

Return the synonyms for this term.

Specified by:

getSynonyms in interface Term

Returns:

the synonyms

intValue

public int intValue()

getName

public String getName()

Description copied from interface: Term

Return the name of this term.

Specified by:

getName in interface Term

Returns:

the name of the term

getDescription

public String getDescription()

Description copied from interface: Term

Return a human-readable description of this term, or the empty string if none is available.

Specified by:

getDescription in interface Term

Returns:

the description of the term

setDescription

public void setDescription(String description)

Description copied from interface: Term

set the description of the term;

Specified by:

setDescription in interface Term

getOntology

public Ontology getOntology()

Description copied from interface: Term

Return the ontology in which this term exists.

Specified by:

getOntology in interface Term

Returns:

the ontology

getAnnotation

public Annotation getAnnotation()

Description copied from interface: Annotatable

Should return the associated annotation object.

Specified by:

getAnnotation in interface Annotatable

Returns:

an Annotation object, never null