Package | Description |
---|---|
org.biojava.ontology |
A general-purpose API for ontologies.
|
org.biojavax.ontology |
Extensions to the biojava ontology model that represent BioSQL ontology.
|
Modifier and Type | Class and Description |
---|---|
static class |
Triple.Impl
Basic in-memory implementation of a Triple in an ontology
This can be used to implement Ontology.createTriple
|
Modifier and Type | Method and Description |
---|---|
Triple |
Ontology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
Creates a new Triple.
|
Triple |
Ontology.Impl.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description) |
Triple |
IntegerOntology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description) |
Modifier and Type | Method and Description |
---|---|
Set<Triple> |
Ontology.getTriples(Term subject,
Term object,
Term predicate)
Return all triples from this ontology which match the supplied
pattern.
|
Set<Triple> |
Ontology.Impl.getTriples(Term subject,
Term object,
Term predicate) |
Modifier and Type | Interface and Description |
---|---|
interface |
ComparableTriple
Comparable triples, obviously.
|
Modifier and Type | Class and Description |
---|---|
class |
SimpleComparableTriple
Basic comparable triple, BioSQL style.
|
Modifier and Type | Method and Description |
---|---|
Triple |
SimpleComparableOntology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
Creates a new Triple.
|
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