org.biojava.stats.svm

Class SimpleSVMClassifierModel

java.lang.Object

org.biojava.stats.svm.AbstractSVMClassifierModel

org.biojava.stats.svm.SimpleSVMClassifierModel

All Implemented Interfaces:

SVMClassifierModel

public class SimpleSVMClassifierModel
extends AbstractSVMClassifierModel

A no-frills implementation of an SVM classifier model.

Author:

Matthew Pocock

Constructor Summary

Constructors

Constructor and Description
SimpleSVMClassifierModel(SVMKernel kernel)
SimpleSVMClassifierModel(SVMKernel kernel, Collection items)
SimpleSVMClassifierModel(SVMKernel kernel, SVMTarget target)

Method Summary

Methods

Modifier and Type	Method and Description
void	addItem(Object item)
void	addItemAlpha(Object item, double alpha)
void	clear()
double	getAlpha(Object item)
SVMKernel	getKernel()
double	getThreshold()
Set	itemAlphas()
Set	items()
void	removeItem(Object item)
void	setAlpha(Object item, double alpha)
void	setThreshold(double threshold)

Methods inherited from class org.biojava.stats.svm.AbstractSVMClassifierModel

classify, setThreshold

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SimpleSVMClassifierModel

public SimpleSVMClassifierModel(SVMKernel kernel)

SimpleSVMClassifierModel

public SimpleSVMClassifierModel(SVMKernel kernel,
                        Collection items)

SimpleSVMClassifierModel

public SimpleSVMClassifierModel(SVMKernel kernel,
                        SVMTarget target)

Method Detail

getKernel

public SVMKernel getKernel()

setThreshold

public void setThreshold(double threshold)

getThreshold

public double getThreshold()

items

public Set items()

itemAlphas

public Set itemAlphas()

getAlpha

public double getAlpha(Object item)

setAlpha

public void setAlpha(Object item,
            double alpha)

Specified by:

setAlpha in interface SVMClassifierModel

Overrides:

setAlpha in class AbstractSVMClassifierModel

addItem

public void addItem(Object item)

Specified by:

addItem in interface SVMClassifierModel

Overrides:

addItem in class AbstractSVMClassifierModel

addItemAlpha

public void addItemAlpha(Object item,
                double alpha)

Specified by:

addItemAlpha in interface SVMClassifierModel

Overrides:

addItemAlpha in class AbstractSVMClassifierModel

removeItem

public void removeItem(Object item)

Specified by:

removeItem in interface SVMClassifierModel

Overrides:

removeItem in class AbstractSVMClassifierModel

clear

public void clear()

Specified by:

clear in interface SVMClassifierModel

Overrides:

clear in class AbstractSVMClassifierModel