Uses of Interface
org.biojava.utils.ChangeListener

Packages that use ChangeListener

Package	Description
org.biojava.bio	The core classes that will be used throughout the bio packages.
org.biojava.bio.dist	Probability distributions over Alphabets.
org.biojava.bio.gui.sequence	Graphical displays of biological sequences and associated annotations.
org.biojava.bio.seq.db	Collections of biological sequence data.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.
org.biojava.bio.seq.projection	Code for projecting Feature objects and systematically altering their properties.
org.biojava.bio.symbol	Representation of the Symbols that make up a sequence, and locations within them.
org.biojava.utils	Miscellaneous utility classes used by other BioJava components.
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.
org.biojavax.ga.functions	GA functions A genetic algorithm requires a number of functions.

Uses of ChangeListener in org.biojava.bio

Classes in org.biojava.bio that implement ChangeListener

Modifier and Type	Class and Description
static class	Annotatable.AnnotationForwarder Deprecated. use new ChangeForwarder.Retyper(source, cs, Annotation.PROPERTY) instead
protected class	MergeAnnotation.PropertyForwarder Listener used to forward changes for any of the underlying annotations to listeners on this annotation.
protected class	OverlayAnnotation.PropertyForwarder Forwards change events from the underlying Annotation to this one.

Uses of ChangeListener in org.biojava.bio.dist

Classes in org.biojava.bio.dist that implement ChangeListener

Modifier and Type	Class and Description
static class	Distribution.NullModelForwarder Deprecated. use new ChangeForwarder.Retyper(this, cs, Annotation.PROPERTY) instead

Uses of ChangeListener in org.biojava.bio.gui.sequence

Classes in org.biojava.bio.gui.sequence that implement ChangeListener

Modifier and Type	Class and Description
static class	PairwiseSequenceRenderer.PairwiseRendererForwarder PairwiseRendererForwarder forward events to other renderers.
static class	SequenceRenderer.RendererForwarder

Methods in org.biojava.bio.gui.sequence with parameters of type ChangeListener

Modifier and Type	Method and Description
void	TranslatedSequencePanel.addChangeListener(ChangeListener cl) addChangeListener adds a listener for all types of change.
void	SequencePoster.addChangeListener(ChangeListener cl) Deprecated.
void	SequencePanel.addChangeListener(ChangeListener cl)
void	PairwiseSequencePanel.addChangeListener(ChangeListener cl) addChangeListener adds a listener for all types of change.
void	TranslatedSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct) addChangeListener adds a listener for specific types of change.
void	SequencePoster.addChangeListener(ChangeListener cl, ChangeType ct) Deprecated.
void	SequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)
void	PairwiseSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct) addChangeListener adds a listener for specific types of change.
void	TranslatedSequencePanel.removeChangeListener(ChangeListener cl) removeChangeListener removes a listener.
void	SequencePoster.removeChangeListener(ChangeListener cl) Deprecated.
void	SequencePanel.removeChangeListener(ChangeListener cl)
void	PairwiseSequencePanel.removeChangeListener(ChangeListener cl) removeChangeListener removes a listener.
void	TranslatedSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct) removeChangeListener removes a listener.
void	SequencePoster.removeChangeListener(ChangeListener cl, ChangeType ct) Deprecated.
void	SequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)
void	PairwiseSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct) removeChangeListener removes a listener.

Uses of ChangeListener in org.biojava.bio.seq.db

Classes in org.biojava.bio.seq.db that implement ChangeListener

Modifier and Type	Class and Description
protected class	SequenceDBWrapper.SequencesForwarder

Uses of ChangeListener in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl with parameters of type ChangeListener

Modifier and Type	Method and Description
void	SubSequence.addChangeListener(ChangeListener cl)
void	LazyFilterFeatureHolder.addChangeListener(ChangeListener cl)
void	SubSequence.addChangeListener(ChangeListener cl, ChangeType ct)
void	LazyFilterFeatureHolder.addChangeListener(ChangeListener cl, ChangeType ct)
void	SubSequence.removeChangeListener(ChangeListener cl)
void	LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl)
void	SubSequence.removeChangeListener(ChangeListener cl, ChangeType ct)
void	LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl, ChangeType ct)

Uses of ChangeListener in org.biojava.bio.seq.projection

Methods in org.biojava.bio.seq.projection with parameters of type ChangeListener

Modifier and Type	Method and Description
void	ProjectedFeature.addChangeListener(ChangeListener cl)
void	ProjectedFeature.addChangeListener(ChangeListener cl, ChangeType ct)
void	ReparentContext.addChangeListener(Feature f, ChangeListener cl, ChangeType ct)
void	ProjectionContext.addChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct) Add a ChangeListener to a projected feature.
void	ProjectedFeature.removeChangeListener(ChangeListener cl)
void	ProjectedFeature.removeChangeListener(ChangeListener cl, ChangeType ct)
void	ReparentContext.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct)
void	ProjectionContext.removeChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct) Remove a ChangeListener from a projected feature.

Uses of ChangeListener in org.biojava.bio.symbol

Classes in org.biojava.bio.symbol that implement ChangeListener

Modifier and Type	Class and Description
class	AbstractSymbolList.EditScreener This adapter screens all edit events to see if they overlap with a window of interest.
class	AbstractSymbolList.EditTranslater This translates edit events that fall within a window into window co-ordinates.
class	SimpleSymbolList Basic implementation of SymbolList.

Uses of ChangeListener in org.biojava.utils

Classes in org.biojava.utils that implement ChangeListener

Modifier and Type	Class and Description
class	ChangeAdapter This is a ChangeListener that ignores everything.
class	ChangeForwarder This is a ChangeListener that is designed to adapt events of one type from one source to events of another type emitted by another source.
static class	ChangeForwarder.Retyper A ChangeForwarder that systematically uses a given type and wraps the old event.
static class	ChangeListener.AlwaysVetoListener An implementation that always vetoes everything.
static class	ChangeListener.ChangeEventRecorder A listener that remembers the ChangeEvent of the last change.
static class	ChangeListener.LoggingListener A listener that writes information about the event stream to a PrintStream.

Fields in org.biojava.utils declared as ChangeListener

Modifier and Type	Field and Description
static ChangeListener	ChangeListener.ALWAYS_VETO Convenience implementation which vetoes every change of which it is notified.
static ChangeListener	ChangeListener.LOG_TO_OUT Convenience implementation that echoes all events to out.

Methods in org.biojava.utils with parameters of type ChangeListener

Modifier and Type	Method and Description
void	Unchangeable.addChangeListener(ChangeListener cl)
void	ChangeSupport.addChangeListener(ChangeListener cl) Add a listener that will be informed of all changes.
void	Changeable.addChangeListener(ChangeListener cl) Deprecated. use addChangeListener(cl, ChangeType.UNKNOWN)
void	AbstractChangeable.addChangeListener(ChangeListener cl)
void	Unchangeable.addChangeListener(ChangeListener cl, ChangeType ct)
void	ChangeSupport.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type (and it's subtypes)
void	Changeable.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.
void	AbstractChangeable.addChangeListener(ChangeListener cl, ChangeType ct)
void	IndexedChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct)
void	ChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct) add a ChangeListener associated with given key.
void	Unchangeable.removeChangeListener(ChangeListener cl)
void	ChangeSupport.removeChangeListener(ChangeListener cl) Remove a listener that was interested in all types of changes.
void	Changeable.removeChangeListener(ChangeListener cl) Deprecated. use removeChangeListener(cl, ChangeType.UNKNOWN)
void	AbstractChangeable.removeChangeListener(ChangeListener cl)
void	Unchangeable.removeChangeListener(ChangeListener cl, ChangeType ct)
void	ChangeSupport.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.
void	Changeable.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.
void	AbstractChangeable.removeChangeListener(ChangeListener cl, ChangeType ct)
void	IndexedChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct)
void	ChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct) remove a ChangeListener associated with given key.

Uses of ChangeListener in org.biojavax.bio.seq

Methods in org.biojavax.bio.seq with parameters of type ChangeListener

Modifier and Type	Method and Description
void	InfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl) Add a listener that will be informed of all changes.
void	InfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.
void	InfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl) Remove a listener that was interested in all types of changes.
void	InfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.

Uses of ChangeListener in org.biojavax.ga.functions

Methods in org.biojavax.ga.functions with parameters of type ChangeListener

Modifier and Type	Method and Description
void	MutationFunction.NoMutation.addChangeListener(ChangeListener cl)
void	CrossOverFunction.NoCross.addChangeListener(ChangeListener cl)
void	MutationFunction.NoMutation.addChangeListener(ChangeListener cl, ChangeType ct)
void	CrossOverFunction.NoCross.addChangeListener(ChangeListener cl, ChangeType ct)
void	MutationFunction.NoMutation.removeChangeListener(ChangeListener c)
void	CrossOverFunction.NoCross.removeChangeListener(ChangeListener c)
void	MutationFunction.NoMutation.removeChangeListener(ChangeListener cl, ChangeType ct)
void	CrossOverFunction.NoCross.removeChangeListener(ChangeListener cl, ChangeType ct)