org.biojavax.bio.phylo.io.nexus

Class NexusComment

java.lang.Object

org.biojavax.bio.phylo.io.nexus.NexusComment

All Implemented Interfaces:

NexusObject

public class NexusComment
extends Object
implements NexusObject

Represents a Nexus comment, possibly nested.

Since:

1.6

Author:

Richard Holland, Tobias Thierer, Jim Balhoff

Constructor Summary

Constructors

Constructor and Description
NexusComment()

Method Summary

Methods

Modifier and Type	Method and Description
void	addCommentText(String text)
void	closeSubComment()
Iterator	commentIterator() This iterator iterates over all parts of the comment.
boolean	hasOpenSubComment()
void	openSubComment()
void	writeObject(Writer writer) Writes this object to the given writer.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NexusComment

public NexusComment()

Method Detail

openSubComment

public void openSubComment()

hasOpenSubComment

public boolean hasOpenSubComment()

closeSubComment

public void closeSubComment()

addCommentText

public void addCommentText(String text)

commentIterator

public Iterator commentIterator()

This iterator iterates over all parts of the comment. Each item returned is either a String or a NexusComment.

Returns:

an iterator over the comment components.

writeObject

public void writeObject(Writer writer)
                 throws IOException

Description copied from interface: NexusObject

Writes this object to the given writer.

Specified by:

writeObject in interface NexusObject

Parameters:

writer - the writer to write to.

Throws:

IOException - if it could not be written.