org.biojavax.bio.seq

Class PositionResolver.AverageResolver

java.lang.Object

org.biojavax.bio.seq.PositionResolver.AverageResolver

All Implemented Interfaces:

PositionResolver

Enclosing interface:

PositionResolver

public static class PositionResolver.AverageResolver
extends Object
implements PositionResolver

The minimal resolver returns the base which provides the average range, halfway between maximal and minimal.

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojavax.bio.seq.PositionResolver

PositionResolver.AverageResolver, PositionResolver.MaximalResolver, PositionResolver.MinimalResolver

Constructor Summary

Constructors

Constructor and Description
PositionResolver.AverageResolver()

Method Summary

Methods

Modifier and Type	Method and Description
int	getMax(Position e) Resolves the maximum possible base for this position.
int	getMin(Position s) Resolves the minimum possible base for this position.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PositionResolver.AverageResolver

public PositionResolver.AverageResolver()

Method Detail

getMin

public int getMin(Position s)

Resolves the minimum possible base for this position. ALWAYS RETURNS s.getStart()+s.getEnd() / 2

Specified by:

getMin in interface PositionResolver

Parameters:

s - the position to resolve

Returns:

the minimum possible base this resolver can return.

getMax

public int getMax(Position e)

Resolves the maximum possible base for this position. ALWAYS RETURNS e.getStart()+e.getEnd() / 2

Specified by:

getMax in interface PositionResolver

Parameters:

e - the position to resolve

Returns:

the maximum possible base this resolver can return.