Uses of Interface
org.biojavax.bio.seq.RichSequenceHandler

Packages that use RichSequenceHandler

Package	Description
org.biojavax	The Biojava extensions packages, classes that extend the core biojava functionality The biojavax packages contain a number of extensions to the core biojava interfaces.
org.biojavax.bio.db.biosql	Interface between biojava and biosql databases
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.

Uses of RichSequenceHandler in org.biojavax

Methods in org.biojavax that return RichSequenceHandler

Modifier and Type	Method and Description
static RichSequenceHandler	RichObjectFactory.getDefaultRichSequenceHandler() Returns the default sequence resolver object.

Methods in org.biojavax with parameters of type RichSequenceHandler

Modifier and Type	Method and Description
static void	RichObjectFactory.setDefaultRichSequenceHandler(RichSequenceHandler rsh) Sets the default sequence handler to use when performing sequence manipulation.

Uses of RichSequenceHandler in org.biojavax.bio.db.biosql

Classes in org.biojavax.bio.db.biosql that implement RichSequenceHandler

Modifier and Type	Class and Description
class	BioSQLRichSequenceHandler A handler which loads sequence data from a BioSQL database, caching it where possible.

Uses of RichSequenceHandler in org.biojavax.bio.seq

Classes in org.biojavax.bio.seq that implement RichSequenceHandler

Modifier and Type	Class and Description
class	DummyRichSequenceHandler