| Package | Description | 
|---|---|
| org.biojava.bio.dp | 
 HMM and Dynamic Programming Algorithms. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
TrainingAlgorithm.train(SequenceDB db,
     double nullWeight,
     StoppingCriteria stopper)
Trains the sequences in db untill stopper says to finnish. 
 | 
void | 
AbstractTrainer.train(SequenceDB db,
     double nullModelWeight,
     StoppingCriteria stopper)
Trains the sequences in db until stopper says to finnish. 
 | 
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