Uses of Interface
org.biojava.bio.program.homologene.OrthoPairCollection

Packages that use OrthoPairCollection

Package	Description
org.biojava.bio.program.homologene	Support classes for Homologene data.

Uses of OrthoPairCollection in org.biojava.bio.program.homologene

Classes in org.biojava.bio.program.homologene that implement OrthoPairCollection

Modifier and Type	Class and Description
class	AbstractOrthoPairCollection An abstract implementation of the OrthoPairCollection interface.
class	SimpleHomologeneDB
class	SimpleOrthoPairCollection

Methods in org.biojava.bio.program.homologene that return OrthoPairCollection

Modifier and Type	Method and Description
OrthoPairCollection	AbstractOrthoPairCollection.filter(OrthoPairSetFilter filters)
OrthoPairCollection	OrthoPairCollection.filter(OrthoPairSetFilter filters)
OrthoPairCollection	HomologeneDB.filter(OrthoPairSetFilter filters) Filter the database for a specified group.
OrthoPairCollection	HomologeneDB.getOrthoPairSets() Get the HomologeneGroups in this database.
OrthoPairCollection	SimpleHomologeneDB.getOrthoPairSets()