Uses of Package
org.biojava.bio.seq.projection

Packages that use org.biojava.bio.seq.projection

Package	Description
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.
org.biojava.bio.seq.projection	Code for projecting Feature objects and systematically altering their properties.

Classes in org.biojava.bio.seq.projection used by org.biojava.bio.seq.impl

Class and Description
ProjectedFeatureHolder Helper class for projecting Feature objects into an alternative coordinate system.
ProjectionContext Interface that defines the projection between original features and projected features.
ReparentContext A good base class to implement ProjectionContext from.

Classes in org.biojava.bio.seq.projection used by org.biojava.bio.seq.projection

Class and Description
Projection Interface implemented by all projected feature objects.
ProjectionContext Interface that defines the projection between original features and projected features.
ProjectionEngine Factory for proxy objects which project BioJava features into alternate coordinate systems.
ReparentContext A good base class to implement ProjectionContext from.