| Package | Description | 
|---|---|
| org.biojava.bio.proteomics.aaindex | 
 Classes and interfaces to load Amino Acid Index database files. 
 | 
| org.biojava.bio.seq | 
 Classes and interfaces for defining biological sequences and informatics
objects. 
 | 
| org.biojava.bio.symbol | 
 Representation of the Symbols that make up a sequence, and locations within
them. 
 | 
| Modifier and Type | Class and Description | 
|---|---|
class  | 
AAindex
Symbol property table based on the Amino Acid Index Database. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
SymbolPropertyTable | 
AAindexStreamReader.nextTable()
Returns the next  
SymbolPropertyTable 
 object. | 
SymbolPropertyTable | 
SymbolPropertyTableIterator.nextTable()
Returns the next  
SymbolPropertyTable 
 object. | 
SymbolPropertyTable | 
SymbolPropertyTableDB.table(String name)
Returns the table with the specified name. 
 | 
SymbolPropertyTable | 
SimpleSymbolPropertyTableDB.table(String name)
Returns the table with the specified name. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
SimpleSymbolPropertyTableDB.addTable(SymbolPropertyTable table)
Adds a symbol property table to the database. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
static SymbolPropertyTable | 
ProteinTools.getSymbolPropertyTable(String name)  | 
| Modifier and Type | Class and Description | 
|---|---|
class  | 
SimpleSymbolPropertyTable
Class that implements the SymbolPropertyTable interface 
 | 
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