| Package | Description |
|---|---|
| org.biojava.bio |
The core classes that will be used throughout the bio packages.
|
| org.biojava.bio.seq.io |
Classes and interfaces for processing and producing flat-file representations
of sequences.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AnnotationChanger
AnnotationChanger remaps the values of an
Annotation to new values specified by a
ValueChanger. |
class |
AnnotationRenamer
AnnotationRenamer remaps the keys of an
Annotation to new keys specified by a
TagMapper. |
class |
BeanAsAnnotation
Create an Annotation with properties matching those of a JavaBean instance.
|
class |
SimpleAnnotation
A no-frills implementation of Annotation that is just a wrapper
around a
LinkedHashMap. |
class |
SmallAnnotation
Annotation that is optimized for memory usage.
|
| Modifier and Type | Class and Description |
|---|---|
class |
ReferenceAnnotation
Deprecated.
Use org.biojavax.bio.seq.io framework instead
|
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