| Package | Description | 
|---|---|
| org.biojava.bio.program.ssaha | 
 SSAHA sequence searching API. 
 | 
| Class and Description | 
|---|
| DataStore
 A repository that can be searched with a sequence. 
 | 
| DataStoreFactory
 
 Builder for a data store. 
 | 
| SearchException
 There has been some failure that prevents a search from completing. 
 | 
| SearchListener
 The interface used to inform interested parties that some sequence has
 been searched and something found. 
 | 
| SearchListener.Wrapper
 A simple wrapper implementation. 
 | 
| SequenceStreamer | 
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