org.biojava.bio.seq.impl

Class SimpleGappedSequence.GappedContext

java.lang.Object

org.biojava.bio.seq.projection.ReparentContext

org.biojava.bio.seq.impl.SimpleGappedSequence.GappedContext

All Implemented Interfaces:

Serializable, ProjectionContext

Enclosing class:

SimpleGappedSequence

public class SimpleGappedSequence.GappedContext
extends ReparentContext

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
GappedContext()

Method Summary

Modifier and Type	Method and Description
Location	mapLocation(Location loc)
Location	projectLocation(Location loc)
Location	revertLocation(Location oldLoc)

Methods inherited from class org.biojava.bio.seq.projection.ReparentContext

addChangeListener, createFeature, createFeature, getParent, getParent, getReverter, getSchema, getSequence, getTransformer, getUnprojectedFeatures, projectChildFeatures, projectFeature, projectFeatures, projectFilter, removeChangeListener, removeFeature, removeFeature, revertFeature, revertFilter

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GappedContext

public GappedContext()

Method Detail

projectLocation

public Location projectLocation(Location loc)

mapLocation

public Location mapLocation(Location loc)

revertLocation

public Location revertLocation(Location oldLoc)