org.biojava.utils.automata

Class PatternBlitz

java.lang.Object

org.biojava.utils.automata.PatternBlitz

public class PatternBlitz
extends Object

Constructor Summary

Constructors

Constructor and Description
PatternBlitz(FiniteAlphabet alfa, org.biojava.utils.automata.StateMachineToolkit factory)

Method Summary

Modifier and Type	Method and Description
void	addPattern(String pattern) add the specified regex to the patterns used for searching.
void	lock()
void	search(SymbolList sl)
void	setListener(PatternListener listener)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PatternBlitz

public PatternBlitz(FiniteAlphabet alfa,
                    org.biojava.utils.automata.StateMachineToolkit factory)

Method Detail

lock

public void lock()

setListener

public void setListener(PatternListener listener)

addPattern

public void addPattern(String pattern)

add the specified regex to the patterns used for searching.

search

public void search(SymbolList sl)
            throws IllegalAlphabetException

Throws:

IllegalAlphabetException