Uses of Interface
org.biojavax.bio.BioEntryIterator

Packages that use BioEntryIterator

Package	Description
org.biojavax.bio.db	Interactions between biojavax objects and a DB.
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.
org.biojavax.bio.seq.io	Classes to support the I/O of RichSequence and Bioentry objects.

Uses of BioEntryIterator in org.biojavax.bio.db

Methods in org.biojavax.bio.db that return BioEntryIterator

Modifier and Type	Method and Description
BioEntryIterator	BioEntryDB.getBioEntryIterator() Returns a BioEntryIterator over all BioEntrys in the database.
BioEntryIterator	AbstractRichSequenceDB.getBioEntryIterator()
BioEntryIterator	AbstractBioEntryDB.getBioEntryIterator()

Uses of BioEntryIterator in org.biojavax.bio.seq

Subinterfaces of BioEntryIterator in org.biojavax.bio.seq

Modifier and Type	Interface and Description
interface	RichSequenceIterator Essentially the same as SequenceIterator.

Classes in org.biojavax.bio.seq that implement BioEntryIterator

Modifier and Type	Class and Description
static class	RichSequence.IOTools.SingleRichSeqIterator Used to iterate over a single rich sequence

Uses of BioEntryIterator in org.biojavax.bio.seq.io

Classes in org.biojavax.bio.seq.io that implement BioEntryIterator

Modifier and Type	Class and Description
class	HashedFastaIterator Iterates over a Fasta file that is kept in memory for optimized access.
class	RichStreamReader Parses a stream into sequences.