| AbstractBeadRenderer |
AbstractBeadRenderer is a an abstract base class
for the creation of FeatureRenderers which use a
'string of beads' metaphor for displaying features.
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| AbstractPeptideDigestRenderer |
A SequenceRenderer that renders a set of Features that match a FeatureFilter in such a way that
they do not overlap in the display.
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| BasicFeatureRenderer |
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| BeadFeatureRenderer |
BeadFeatureRenderers use a 'string of beads'
metaphor for displaying features.
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| CircularFeatureRenderer |
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| CircularRenderer |
Render information from a CircularRendererContext onto a graphics context.
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| CircularRendererContext |
A context providing information for rendering sequences into circular coordinate systems.
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| FeatureLabelRenderer.LabelMaker |
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| FeatureRenderer |
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| FeatureSource |
A closure that allows AbstractPeptideDigestRenderer implementations to obtain the features of the rendered sequence.
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| FilteringRenderer |
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| GlyphFeatureRenderer |
A FeatureRenderer that renders a particular Glyph for Features accepted by a
particular FeatureFilter
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| ImageMap |
ImageMap represents a collection of image map
hotspots.
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| ImageMap.HotSpot |
HotSpots represent an image map hotspot.
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| ImageMapRenderer |
ImageMapRenderers create strings representing
Features suitable for use in HTML image
maps.
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| LabelRenderer |
The interface for things that can render labels for a line of information
about a sequence.
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| LayeredRenderer |
LayeredRenderer handles the lane offsets for
MultiLineRenders.
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| MultiLineRenderer |
MultiLineRenderer is a SequenceRenderer
which collects a number of other SequenceRenderers
each of which render their own view of a Sequence.
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| OverlayMarker |
This is a dummy interface to permit identification of renderers whose
output is to be overlaid along the lines of the Marker Interface
pattern.
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| PairwiseRenderContext |
PairwiseRenderContext encapsulates information
required for the rendering of a pair of sequences.
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| PairwiseSequenceRenderer |
PairwiseSequenceRenderers render information about the
relationship between two sequences.
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| RectangularBeadRenderer |
RectangularBeadRenderer renders features as simple
rectangles.
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| SequencePanel |
A panel that displays a Sequence.
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| SequenceRenderContext |
A context within which sequence information may be rendered.
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| SequenceRenderContext.Border |
The metric object for the 'border' area - the area between the extent of
the rendered area and the beginning or end of the sequence.
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| SequenceRenderer |
The interface for things that can render a line of information about a
sequence.
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| SequenceRendererWrapper |
An implementation of SequenceRenderer that delegates rendering to another
renderer.
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| SequenceViewerEvent |
An event indicating that a mouse gesture was recognised within a widget that
renders sequences.
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| SequenceViewerListener |
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| SequenceViewerMotionListener |
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| SixFrameRenderer |
Class that handles drawing in six frames for other
classes.
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| ZiggyFeatureRenderer |
A feature renderer that draws non-contiguous features as a set of boxes
joined by zig-zags.
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