AbstractOrthoPairCollection (biojava-legacy 1.9.5 API)

java.lang.Object
- org.biojava.bio.program.homologene.AbstractOrthoPairCollection

All Implemented Interfaces:

OrthoPairCollection

Direct Known Subclasses:

SimpleOrthoPairCollection
```
public abstract class AbstractOrthoPairCollection
extends Object
implements OrthoPairCollection
```
An abstract implementation of the OrthoPairCollection interface. Its primary role is to implement the filter() method.i

Author:

David Huen

Nested Class Summary
- Nested classes/interfaces inherited from interface org.biojava.bio.program.homologene.OrthoPairCollection
  OrthoPairCollection.Iterator

Constructor Summary

Constructors
Constructor Description

AbstractOrthoPairCollection()

Method Summary

All Methods Instance Methods Abstract Methods Concrete Methods
Modifier and Type	Method	Description
`abstract void`	`add(OrthoPairSet group)`
`abstract boolean`	`contains(OrthoPairSet group)`
`OrthoPairCollection`	`filter(OrthoPairSetFilter filters)`
`abstract boolean`	`isEmpty()`
`abstract OrthoPairCollection.Iterator`	`iterator()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - AbstractOrthoPairCollection
```
public AbstractOrthoPairCollection()
```
- Method Detail
  - add
```
public abstract void add(OrthoPairSet group)
```
    Specified by:
    
    add in interface OrthoPairCollection
  - contains
```
public abstract boolean contains(OrthoPairSet group)
```
    Specified by:
    
    contains in interface OrthoPairCollection
  - isEmpty
```
public abstract boolean isEmpty()
```
    Specified by:
    
    isEmpty in interface OrthoPairCollection
  - iterator
```
public abstract OrthoPairCollection.Iterator iterator()
```
    Specified by:
    
    iterator in interface OrthoPairCollection
  - filter
```
public OrthoPairCollection filter(OrthoPairSetFilter filters)
```
    Specified by:
    
    filter in interface OrthoPairCollection