Package org.biojava.bio.program.phred
Interface Qualitative
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- All Known Implementing Classes:
PhredSequence
public interface Qualitative
Qualitative is an interface for classes wanting to hold quality data in symbolic form such as Phred scores.
Copyright (c) 2001
Company: AgResearch
- Since:
- 1.1
- Author:
- Mark Schreiber
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description SymbolList
getQuality()
Retreives the list of quality symbols from the underlying object.Symbol
getQualityAt(int index)
Retreives the quality symbol for the specified index.
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Method Detail
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getQuality
SymbolList getQuality()
Retreives the list of quality symbols from the underlying object.
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getQualityAt
Symbol getQualityAt(int index) throws IndexOutOfBoundsException
Retreives the quality symbol for the specified index.- Parameters:
index
- - Must be greater than zero.- Throws:
IndexOutOfBoundsException
- if index is outside of the quality symbol list.
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