Package org.biojava.bio.program.phred

Parser for Phred output

Interface Summary

Interface	Description
Qualitative	Qualitative is an interface for classes wanting to hold quality data in symbolic form such as Phred scores.

Class Summary

Class	Description
PhredFormat	Format object representing Phred Quality files.
PhredSequence	PhredSequence is an extension of SimpleSequence that implements Qualitative to hold Phred quality scores.
PhredTools	PhredTools contains static methods for working with phred quality data.