public interface UnigeneCluster extends Annotatable
A single unigene cluster.
This represents all of the information available about a single unigene cluster. This includes the sequences that are in it, the unique sequence that is its representative, the cluster id and all the annotation available via the data file. Much of the annotation may be accessible via the getAnnotation() method.
There is much more information in the Unigene clusters than just the id, title and sequences. This is all stoored in the annotation associated with the cluster. The annotation bundle conforms to the schema in
- Matthew Pocock
All Methods Instance Methods Abstract Methods Modifier and Type Method Description
getAll()All sequences that map to this cluster.
getID()The public unigene ID.
getTitle()The cluster title.
getUnique()The unique sequence that is used as a representative for this cluster.
getAllAll sequences that map to this cluster.
- a SequenceDB of all sequences mapping to this cluster.