Uses of Package
org.biojava.bio.seq.homol

Packages that use org.biojava.bio.seq.homol

Package	Description
org.biojava.bio.seq.homol	The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.

Classes in org.biojava.bio.seq.homol used by org.biojava.bio.seq.homol

Class	Description
Homology	Signifies that two or more features are homologous.
SimilarityPairFeature	SimilarityPairFeature describes a pairwise similarity between two nucleotide sequences (as it extends StrandedFeature).

Classes in org.biojava.bio.seq.homol used by org.biojava.bio.seq.impl

Class	Description
Homology	Signifies that two or more features are homologous.
HomologyFeature
HomologyFeature.Template
SimilarityPairFeature	SimilarityPairFeature describes a pairwise similarity between two nucleotide sequences (as it extends StrandedFeature).
SimilarityPairFeature.Template	Template for construction of SimilarityPairFeatures.