Package org.biojava.bio.seq.impl
Class SimpleRemoteFeature.DBResolver
- java.lang.Object
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- org.biojava.bio.seq.impl.SimpleRemoteFeature.DBResolver
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- All Implemented Interfaces:
RemoteFeature.Resolver
- Enclosing class:
- SimpleRemoteFeature
public static class SimpleRemoteFeature.DBResolver extends Object implements RemoteFeature.Resolver
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Constructor Summary
Constructors Constructor Description DBResolver(SequenceDB seqDB)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description SequenceDB
getSeqDB()
Feature
resolve(RemoteFeature rFeat)
Resolve rFeat.
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Constructor Detail
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DBResolver
public DBResolver(SequenceDB seqDB)
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Method Detail
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getSeqDB
public SequenceDB getSeqDB()
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resolve
public Feature resolve(RemoteFeature rFeat) throws BioException
Description copied from interface:RemoteFeature.Resolver
Resolve rFeat.This method returns a Feature that represents the RemoteFeature rFeat on some Sequence where all of the Regions can be represented localy. This may be an assembly of the parent sequence of rFeat and each of the Sequences that have IDs listed in the Region list of rFeat.
- Specified by:
resolve
in interfaceRemoteFeature.Resolver
- Parameters:
rFeat
- the RemoteFeature to resolve- Returns:
- a Feature on some other Seqence where each Region of rFeat is resolved into a local Location
- Throws:
BioException
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