Package org.biojava.bio.seq.io.filterxml

Class XMLAnnotationTypeHandler

java.lang.Object

org.biojava.utils.stax.StAXContentHandlerBase

org.biojava.bio.seq.io.filterxml.XMLAnnotationTypeHandler

All Implemented Interfaces:

StAXContentHandler

public class XMLAnnotationTypeHandler
extends StAXContentHandlerBase

StAX handler for parsing AnnotationTypes in FilterXML documents. Mainly used internally by XMLFilterHandler.

Since:

1.3

Author:

Thomas Down

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static interface	XMLAnnotationTypeHandler.CollectionConstraintHandler	Handler for an individual CollectionConstraint in an AnnotationType.
static interface	XMLAnnotationTypeHandler.CollectionConstraintHandlerFactory	Handler Factory for a CollectionConstraint in an AnnotationType.
static interface	XMLAnnotationTypeHandler.PropertyConstraintHandler	Handler for an individual PropertyConstraint in an AnnotationType.
static interface	XMLAnnotationTypeHandler.PropertyConstraintHandlerFactory	Handler Factory for a PropertyConstraint in an AnnotationType.

Constructor Summary

Constructors

Constructor	Description
XMLAnnotationTypeHandler()	Construct a new XMLAnnotationTypeHandler which can parse the builtin PropertyConstraints.

Method Summary

Modifier and Type	Method	Description
void	endElement(String nsURI, String localName, String qName, StAXContentHandler delegate)
AnnotationType	getAnnotationType()	Return the AnnotationType built by this handler
void	registerCollectionHandlerFactory(String nsURI, String localName, XMLAnnotationTypeHandler.CollectionConstraintHandlerFactory factory)	Register a factory used to create handlers for the specified tag in an XML AnnotationType
void	registerPropertyHandlerFactory(String nsURI, String localName, XMLAnnotationTypeHandler.PropertyConstraintHandlerFactory factory)	Register a factory used to create handlers for the specified tag in an XML AnnotationType
void	startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm)

Methods inherited from class org.biojava.utils.stax.StAXContentHandlerBase

characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XMLAnnotationTypeHandler

public XMLAnnotationTypeHandler()

Construct a new XMLAnnotationTypeHandler which can parse the builtin PropertyConstraints.

Method Detail

getAnnotationType

public AnnotationType getAnnotationType()

Return the AnnotationType built by this handler

registerPropertyHandlerFactory

public void registerPropertyHandlerFactory(String nsURI,
                                           String localName,
                                           XMLAnnotationTypeHandler.PropertyConstraintHandlerFactory factory)

Register a factory used to create handlers for the specified tag in an XML AnnotationType

registerCollectionHandlerFactory

public void registerCollectionHandlerFactory(String nsURI,
                                             String localName,
                                             XMLAnnotationTypeHandler.CollectionConstraintHandlerFactory factory)

Register a factory used to create handlers for the specified tag in an XML AnnotationType

startElement

public void startElement(String nsURI,
                         String localName,
                         String qName,
                         Attributes attrs,
                         DelegationManager dm)
                  throws SAXException

Specified by:

startElement in interface StAXContentHandler

Overrides:

startElement in class StAXContentHandlerBase

Throws:

SAXException

endElement

public void endElement(String nsURI,
                       String localName,
                       String qName,
                       StAXContentHandler delegate)
                throws SAXException

Specified by:

endElement in interface StAXContentHandler

Overrides:

endElement in class StAXContentHandlerBase

Throws:

SAXException