Class SystemRegistry


  • public class SystemRegistry
    extends Object

    A registry that loads up the standard biodirectory files.

    This class will search for the following files in turn:

    1. ~/.bioinformatics/seqdatabase.ini where ~ is the JAVA user home system property
    2. /etc/bioinformatics/seqdatabase.ini
    3. "http://www.open-bio.org/registry/seqdatabase.ini

    The default search path may be replaced by an alternative search path specified by the OBDA_SEARCH_PATH system environment variable. This environment variable is a "+" delimted string of files and URLs. The search order proceeds from read left to right.

    Author:
    Thomas Down, Matthew Pocock, Keith James