Uses of Interface
org.biojavax.bio.BioEntryIterator

Packages that use BioEntryIterator

Package	Description
org.biojavax.bio.db	Interactions between biojavax objects and a DB.
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.
org.biojavax.bio.seq.io	Classes to support the I/O of RichSequence and Bioentry objects.

Uses of BioEntryIterator in org.biojavax.bio.db

Methods in org.biojavax.bio.db that return BioEntryIterator

Modifier and Type	Method	Description
BioEntryIterator	AbstractBioEntryDB.getBioEntryIterator()
BioEntryIterator	AbstractRichSequenceDB.getBioEntryIterator()
BioEntryIterator	BioEntryDB.getBioEntryIterator()	Returns a BioEntryIterator over all BioEntrys in the database.

Uses of BioEntryIterator in org.biojavax.bio.seq

Subinterfaces of BioEntryIterator in org.biojavax.bio.seq

Modifier and Type	Interface	Description
interface	RichSequenceIterator	Essentially the same as SequenceIterator.

Classes in org.biojavax.bio.seq that implement BioEntryIterator

Modifier and Type	Class	Description
static class	RichSequence.IOTools.SingleRichSeqIterator	Used to iterate over a single rich sequence

Uses of BioEntryIterator in org.biojavax.bio.seq.io

Classes in org.biojavax.bio.seq.io that implement BioEntryIterator

Modifier and Type	Class	Description
class	HashedFastaIterator	Iterates over a Fasta file that is kept in memory for optimized access.
class	RichStreamReader	Parses a stream into sequences.