Uses of Class
org.biojavax.bio.phylo.io.nexus.NexusFile

Packages that use NexusFile

Package	Description
org.biojavax.bio.phylo.io.nexus	Classes to support the I/O of Nexus files.

Uses of NexusFile in org.biojavax.bio.phylo.io.nexus

Methods in org.biojavax.bio.phylo.io.nexus that return NexusFile

Modifier and Type	Method	Description
NexusFile	NexusFileBuilder.getNexusFile()	Obtain the constructed file.

Methods in org.biojavax.bio.phylo.io.nexus with parameters of type NexusFile

Modifier and Type	Method	Description
static void	NexusFileFormat.writeFile(File file, NexusFile nexusFile)	Writes the given Nexus output to a file.
static void	NexusFileFormat.writeStream(OutputStream os, NexusFile nexusFile)	Writes the given Nexus output to a stream.
static void	NexusFileFormat.writeWriter(Writer writer, NexusFile nexusFile)	Writes the given Nexus output to a writer.